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Archive for February, 2009

C. elegans Data Release Report for 2/2-2/8, 2009

February 9th, 2009 nicole No comments

C. elegans Data Release Report for 2/2-2/8, 2009

This week we’ve released 8 C. elegans data sets:
Lieb – 8 ChIP-chip data sets
on the following kinds of samples:

antibodys: flag, hcp-3, histone h3, na, rna polymerase ii ctd repeat ysptsps, trimethylated lys-36 of histone h3, trimethylated lys-4 of histone h3, trimethylated lys-9 on histone h3

stages: embryo, l3 larva

strains: N2, SS0881

tissue: whole organism

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D. melanogaster Data Release Report for 2/2-2/8, 2009

February 9th, 2009 nicole No comments

This week we’ve released 2 D. melanogaster data sets:
Celniker – 1 RTPCR, RACE data sets
White – 1 ChIP-chip data sets
on the following kinds of samples:

antibodies: h3k4me3, no antibody control

stages: cleavage stage, embryonic stage 1, embryonic stage 2, embryonic stage 3, embryonic stage 4, embryonic stage 5, embryonic stage 6, extended germ band stage, gastrula stage, pre-blastoderm stage

strain: y; cn bw sp

tissues: blastoderm cell, early embryonic cell, gastrula cell, whole organism

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modMine release 7

February 5th, 2009 admin No comments

modMine release 7
With the first C. elegans submissions.

Categories: modMine Tags:

D. melanogaster Data Release Report for 1/26-2/1, 2009

February 2nd, 2009 nicole No comments

This week we’ve released 56 D. melanogaster data sets:
Celniker – 51 RNA tiling array data sets
White – 5 ChIP-chip data sets
on the following kinds of samples:
antibodys: beaf-32, cp190, gaf, mod(mdg4), no antibody control, su(hw)
cell lines: 1182-4H, CME L1, CME W1 Cl.8+, CME W2, GM2, Kc167, ML-DmBG1-c1, ML-DmBG3-c2, ML-DmD11, ML-DmD16-c3, ML-DmD17-c3, ML-DmD20-c2, ML-DmD20-c5, ML-DmD21, ML-DmD32, ML-DmD4-c1, ML-DmD8, ML-DmD9, S1, S2-DRSC, S2R+, S3, Sg4, mbn2
stages: adult stage, blastoderm stage, cleavage stage, early extended germ band stage, egg stage, embryonic stage, embryonic stage 1, embryonic stage 10, embryonic stage 11, embryonic stage 12, embryonic stage 13, embryonic stage 14, embryonic stage 15, embryonic stage 17, embryonic stage 2, embryonic stage 3, embryonic stage 5, embryonic stage 6, embryonic stage 7, embryonic stage 8, embryonic stage 9, fertilized egg stage, first instar larval stage, larval stage, late embryonic stage, late extended germ band stage, prepupal stage, prepupal stage p1, second instar larval stage, third instar larval stage, unfertilized egg stage
strain: y; cn bw sp
tissues: antenna disc-derived cell-line, cns-derived cell-line, dorsal mesothoracic disc, embryo, embryo-derived cell-line, embryonic/larval hemocyte, eye-antenna disc-derived cell-line, imaginal disc-derived cell-line, ventral prothoracic disc, whole organism
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C. elegans Data Release Report for 1/26-2/1, 2009

February 2nd, 2009 nicole No comments

This week we’ve released 1 C. elegans data sets:
Waterston – 1 RACE data sets
on the following kinds of samples:

stages: adult, all stages, l1 larva, l2 larva, l3 larva, l4 larva
strain: N2
tissue: whole organism

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