modENCODE Blog

If  you exported CDS or mRNA features for submissions of the Waterston experiment: ‘Definition of comprehensive set of C. elegans transcripts and expression for various stages and conditions’ from the previous release of modMine (release 17) please check and re-export the data. While the CDS and mRNA features were correct for the experiment as a whole, too few were assigned to each submission.

Please contact help@modencode.org if you have any questions. Our sincere apologies for the error which is now fixed.

modMine release 18

This release contains the same data as release 17  (freeze of 1st of February 2010), with the addition of 9 C. Elegans submissions from the Waterston project that did not make it to the previous release.

Release 18 contains 1040 submissions, 729 for fly and 311 for worm. 2 of the fly submissions relate to Drosophila Pseudoscura.

In this release the display of the expression levels related to a certain feature has been corrected (those were named as ‘experimental features’ in the previous release), a bug related to the association of features common to different submissions of a certain experiment has been fixed (see post) and more feature relationships and properties are now considered.