C. elegans Data Release Report for 6/1-6/7, 2009
This week we’ve released 7 C. elegans data sets:
Snyder – 7 ChIP-seq data sets
on the following kinds of samples:
antibodys: daf-16, pha-4, RNA pol II
stages: embryo, l1 larva, l4 larva, l4-adult molt, newly molted young adult hermaphrodite
strains: OP37, TJ356
tissue: whole organism
Here’s the breakdown by project:
Snyder Project
| Data Type | Experiment type | Details | Links | Comments |
|---|---|---|---|---|
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism
Strains: OP37 Stages: L1 larva Antibodies: pha-4 (via anti_GFP) Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism Strains: OP37 Stages: L1 larva Antibodies: pha-4 (via anti-GFP) Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism Strains: OP37 Stages: embryo Antibodies: RNA pol II Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism Strains: OP37 Stages: L1 larva Antibodies: RNA pol II Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism Strains: OP37 Stages: L1 larva Antibodies: RNA pol II Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism Strains: TJ356 Stages: L4 larva, L4-adult molt, newly molted young adult hermaphrodite Antibodies: daf-16 (via anti-GFP) Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
| chromatin binding site peaks (GFF), chromatin binding signal (WIG) | ChIP-seq | Tissues: whole organism Strains: TJ356 Stages: L4 larva, L4-adult molt, newly molted young adult hermaphrodite Antibodies: RNA pol II Embargoed until 9 months from 2009-05-27 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
Categories: Worm Data Release C. elegans, ChIP-Seq, chromatin binding sites, developmental stage, Snyder