D. melanogaster Data Release Report for 2/2-2/8, 2009
This week we’ve released 2 D. melanogaster data sets:
Celniker – 1 RTPCR, RACE data sets
White – 1 ChIP-chip data sets
on the following kinds of samples:
antibodies: h3k4me3, no antibody control
stages: cleavage stage, embryonic stage 1, embryonic stage 2, embryonic stage 3, embryonic stage 4, embryonic stage 5, embryonic stage 6, extended germ band stage, gastrula stage, pre-blastoderm stage
strain: y; cn bw sp
tissues: blastoderm cell, early embryonic cell, gastrula cell, whole organism
Here’s the breakdown by project:
Celniker Project
| Data Type | Experiment type | Details | Links | Comments |
|---|---|---|---|---|
| EST alignments (GFF) | 5′ RACE | Tissues: early embryonic cell, blastoderm cell, gastrula cell
Strains: y; cn bw sp Stages: cleavage stage, extended germ band stage, gastrula stage, pre-blastoderm stage Embargoed until 9 months from 2008-03-26 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
White Project
| Data Type | Experiment type | Details | Links | Comments |
|---|---|---|---|---|
| chromatin binding site (GFF) signal data (WIG) | ChIP-chip | Tissues: whole organism Strains: y; cn bw sp Stages: embryonic stage 1, embryonic stage 2, embryonic stage 3, embryonic stage 4, embryonic stage 5, embryonic stage 6, and 4 more… Antibodies: H3K4me3, No Antibody Control Embargoed until 9 months from 2008-08-11 |
ChadoXML | Tracks | Stanza | Raw Data | details… |