D. melanogaster Data Release Report for 7/6-7/12, 2009
This week we’ve released 2 D. melanogaster data sets:
Celniker – 1 RNA-seq data sets
White – 1 ChIP-chip data sets
on the following kinds of samples:
antibodies: h3k9me3, no antibody control
cell line: Kc167
stages: late embryonic stage, third instar larval stage
strain: y; cn bw sp
tissues: embryo-derived cell-line, whole organism
Here’s the breakdown by project:
Celniker Project
| Data Type | Experiment type | Details | Links | Comments |
|---|---|---|---|---|
| alignments (SAM) | RNA-seq | Tissues: embryo-derived cell-line Lines: Kc167 Stages: late embryonic stage Embargoed until 9 months from 2009-06-15 |
ChadoXML | Tracks | Stanza | Raw Data | details… paired-end data, aligning to splice junctions |
White Project
| Data Type | Experiment type | Details | Links | Comments |
|---|---|---|---|---|
| chromatin binding peaks (GFF), chromatin binding signal (WIG) | ChIP-chip | Tissues: whole organism Strains: y; cn bw sp Stages: third instar larval stage Antibodies: H3K9me3, No Antibody Control Embargoed until 9 months from 2009-03-06 |
ChadoXML | Tracks | Stanza | Raw Data | details… |
Categories: Fly Data Release cell line, Celniker, ChIP-chip, developmental stage, drosophila, RNA-Seq, White