This week we’ve released 1 D. melanogaster data sets:
White – 1 ChIP-chip data sets
on the following kinds of samples:
antibodys: h3k9ac, no antibody control
stage: pupal stage
strain: y; cn bw sp
tissue: whole organism
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This week we’ve released 24 C. elegans data sets:
Lieb – 7 ChIP-chip data sets
Waterston – 17 RNA tiling array data sets
on the following kinds of samples:
antibodies: dpy-27, no antibody control, rna polii ctd domain unphosophorylated, sdc-2, sdc-3, trimethylated lys-9 on histone h3
stages: blastula embryo, elongating embryo, embryo, enclosing embryo, fully-elongated embryo, gastrulating embryo, l1 larva, l2 larva, l3 larva, l4 larva, l4 larva male, late cleavage stage embryo, newly molted young adult hermaphrodite
strains: 11dh, CB4689, JK1107, N2, YPT41, YPT47
tissues: hermaphrodite gonad, whole organism
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This week we’ve released 21 D. melanogaster data sets:
Lai – 1 RNA-seq (small RNAs) data sets
White – 20 ChIP-chip data sets
on the following kinds of samples:
antibodies: h3k27me3, h3k4me1, h3k4me3, h3k9ac, h3k9me3, no antibody control
stages: adult stage, embryonic stage 10, embryonic stage 11, embryonic stage 12, embryonic stage 15, embryonic stage 16, embryonic stage 17, embryonic stage 9, first instar larval stage, second instar larval stage
strains: Canton-S, y; cn bw sp
tissues: adult head, whole organism
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This week we’ve released 5 D. melanogaster data sets:
MacAlpine – 4 RNA tiling array data sets
White – 1 ChIP-chip data sets
on the following kinds of samples:
antibodys: h3k27me3, no antibody control
cell line: S2-DRSC
stages: cleavage stage, early extended germ band stage, embryonic stage, embryonic stage 1, embryonic stage 2, embryonic stage 3, third instar larval stage
strains: Oregon-R-modENCODE, Oregon-R_Orr-Weaver, w[1118], y; cn bw sp
tissues: embryo-derived cell-line, larval salivary gland, oocyte associated follicle cell, whole organism
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This week we’ve released 2 C. elegans data sets:
Lieb – 2 ChIP-chip data sets
on the following kinds of samples:
antibodies: dpy-27, no antibody control, rna polii ctd domain unphosophorylated
stage: l4 larva
strain: N2
tissue: whole organism
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This week we’ve released 2 D. melanogaster data sets:
Celniker – 1 RNA-seq data sets
White – 1 ChIP-chip data sets
on the following kinds of samples:
antibodies: h3k9me3, no antibody control
cell line: Kc167
stages: late embryonic stage, third instar larval stage
strain: y; cn bw sp
tissues: embryo-derived cell-line, whole organism
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This week we’ve released 6 D. melanogaster data sets:
Lai – 1 RNA-seq data sets
MacAlpine – 5 ChIP-chip data sets
on the following kinds of samples:
antibodies: drosophila orc2p, mcm2-7 complex
cell lines: Kc167, ML-DmBG3-c2, S2-DRSC
stages: first instar larval stage, late embryonic stage, third instar larval stage
strain: Canton-S
tissues: cns-derived cell-line, embryo-derived cell-line, whole organism
This week we’ve released 4 C. elegans data sets:
Lieb – 4 ChIP-chip data sets
on the following kinds of samples:
antibodys: dpy-27, htz-1, no antibody control, rna polii ctd domain unphosophorylated, sdc-3
stage: embryo
strain: N2
tissue: whole organism
This week we’ve released 11 D. melanogaster data sets:
Celniker – 1 Computational annotation and 6 RNA sample creation and 3 RNA tiling array data sets
Karpen – 1 ChIP-chip data sets
on the following kinds of samples:
antibody: h3k27ac
cell lines: 1182-4H, CME L1, CME W1 Cl.8+, CME W2, G2, GM2, Kc167, ML-DmBG1-c1, ML-DmBG2-c2, ML-DmBG3-c2, ML-DmD11, ML-DmD16-c3, ML-DmD17-c3, ML-DmD20-c2, ML-DmD20-c5, ML-DmD21, ML-DmD23-c4, ML-DmD32, ML-DmD4-c1, ML-DmD8, ML-DmD9, S1, S2-DRSC, S2R+, S3, Sg4, mbn2
stages: adult stage, cleavage stage, dorsal closure stage, early extended germ band stage, egg stage, embryonic stage, embryonic stage 1, larval stage, late embryonic stage, third instar larval stage
strains: Oregon-R-modENCODE, y; cn bw sp
tissues: antenna disc-derived cell-line, blastoderm cell, cns-derived cell-line, dorsal mesothoracic disc, early embryonic cell, embryo-derived cell-line, embryonic/larval hemocyte, eye-antenna disc-derived cell-line, gastrula cell, imaginal disc-derived cell-line, ventral prothoracic disc, whole organism
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This week we’ve released 8 C. elegans data sets:
Lieb – 3 ChIP-chip data sets
Snyder – 5 ChIP-seq data sets
on the following kinds of samples:
antibodies: ama-1, dpy-27, mab-5, pha-4, sdc-3, RNA Polymerase II
stages: embryo, l3 larva, l4 larva, l4-adult molt, newly molted young adult hermaphrodite
strains: N2, OP26, OP34, OP37
tissue: whole organism