modENCODE Blog » Piano http://blog.modencode.org weblog of the modENCODE Data Coordination Center Wed, 01 Feb 2012 16:46:47 +0000 http://wordpress.org/?v=2.8.1 en hourly 1 C. elegans Data Release Report for 5/11-5/17, 2009 http://blog.modencode.org/c-elegans-data-release-report-for-511-517-2009 http://blog.modencode.org/c-elegans-data-release-report-for-511-517-2009#comments Sun, 17 May 2009 23:05:18 +0000 nicole http://blog.modencode.org/?p=317 This week we’ve released 1 C. elegans data sets:
Piano – 1 RACE, Computational annotation data sets
on the following kinds of samples:
stages: adult, embryo, l1 larva, l2 larva, l3 larva, l4 larva
strain: N2
tissue: whole organism

Here’s the breakdown by project:

Piano Project

Data Type Experiment type Details Links Comments
transcription/coding junctions, alignments, trace reads, gene models, EST alignments, three_prime_RACE_clone, polyA_site, three_prime_RST, three_prime_UST (all alignments in GFF) RACE, Computational annotation Tissues: whole organism
Strains: N2
Stages: L1 larva, L2 larva, L3 larva, L4 larva, adult, embryo, and 2 more…
Embargoed until 9 months from 2009-04-15 		ChadoXML | Tracks | Stanza | Raw Data details… ESTs submitted to dbEST, aligned here, 3′UTR annotations extended
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